FastQCFastQC Report
Tue 24 Jan 2023
stdin

Summary

[OK]Basic Statistics

MeasureValue
Filenamestdin
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1222
Sequences flagged as poor quality0
Sequence length22-100
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGCGAGGCTCCAGAGCTGCATGCTCCCGGCTCGAGCCCTCGCCGTAGTT50.4091653027823241No Hit
TCCACAGGGTGAATCTTGTTGTAGTCAGCCGGGTCAGCGAAGGTCAGAGG50.4091653027823241No Hit
CTCTTTCTTTGTGCGATTCTTTGGCATCAGATCAAGGCTCTCATCAAGAA50.4091653027823241No Hit
TTATCCAGCAAGCTTTCATTAACGTGGCCAAAAAACATTTTGGCGAATTT40.32733224222585927No Hit
ACTTCTCTCAAGGTTAAACAGCCAGTGGTCCAGGTGACTAGCAAGTGAAC40.32733224222585927No Hit
AATGGACAGGGGCACTGAGAAAAGCGTCATGAATGTGGTGCGGAACCTCA40.32733224222585927No Hit
CGAAGACTCATTACTGGGAAAATGAGAGTTCAACTTCATATTCTGTGAAG40.32733224222585927No Hit
GCTTGCCTGACAGAAACATGGCATCAGGTGGGTGGTGATCGGAGACGAGA40.32733224222585927No Hit
TGGAAGTAAAGAGGGGTCAGCGCAAATAGAACCTTCACGGGGCTTGATGC30.24549918166939444No Hit
CGAGGCTCCAGAGCTGCATGCTCCCGGCTCGAGCCCTCGCCGTAGTTCTC30.24549918166939444No Hit
AAACATTTTGGCGAATTTTTCAACCTTAACCAAACTGTTCAGGTAAGCAC30.24549918166939444No Hit
GCGAGGAAGGGCCCCTCCAGCCCCTTTACCGGGAGCCTCAGGATGCCCAG30.24549918166939444No Hit
ACTATGTACTTGTTGCTTCCCCAATTTGGAAGTTCTTCCAGTGAGCCTGT30.24549918166939444No Hit
CTCTCTGATTTTGTTGTATAAACGGGTCTCATTCTCCCTTACAACTTCTT30.24549918166939444No Hit
CAGGGAAGAGCTGGGTGGTGGAGAGAGCTGAGCCTGTGTGGACCCCTGAT30.24549918166939444No Hit
CATCCACCTTCTCACCCCCTGTCTGCAACCCAACCTAACATCATAGCCGC30.24549918166939444No Hit
CCCACAGAGCTACGGCAACATCTTTGAGTCAAACATACAAATTTGGGAGT30.24549918166939444No Hit
GCCGGGGCAGGCATTCCCAGGACGGGGCTCGGCCCAGCAAAGCCCAGAGT30.24549918166939444No Hit
GCCCTTCAGTGGATCTCTTTGCTGGAGAATTGACAGAGTGCGTGTCGCGC30.24549918166939444No Hit
CCAAGTAGCAGAGAAAGCATCCCCCAGCTCTGACAGGGAGACAGCACATG30.24549918166939444No Hit
CATAGCCGCACAAACTCTGCCACACATCTCCATGACACCAGGGACCCTAT30.24549918166939444No Hit
CTTCAAGAGCAGAGTGAGACCGCTACCAAGAGAAGAATCCTTAAGGAGAG30.24549918166939444No Hit
AAGGGCCCCTCCAGCCCCTTTACCGGGAGCCTCAGGATGCCCAGGCGCCA30.24549918166939444No Hit
CGGTTTGCAGGTCTAGGGAACTCAGTCTCCTGGAATGGGTCAGTGTATCA30.24549918166939444No Hit
GTCTTTTTTATCTAACCAGAGCACGATTGAAGACATAAAAGTGAAACACA30.24549918166939444No Hit
GGGAAGGAAGCTTCCTGGCCCACAGTTGCCTGGGTGCAGGCTGGTGGCAA30.24549918166939444No Hit
AGAGCTGCATGCTCCCGGCTCGAGCCCTCGCCGTAGTTCTCGTCTCCGAT30.24549918166939444No Hit
TGAGGGCTCTGGGTTTCTCCCCTCCTGGCCTCCATAGCCCAGAACGTCAT30.24549918166939444No Hit
AGTGCTTGGTCAGCCATGACCCTGCACCATGCGAGTGACATTGGGACTGG30.24549918166939444No Hit
AAGAGATTTTTAACCCTCTGGGGACGCCTTCACAGAATATGAAGTTGAAC30.24549918166939444No Hit
CACCCAGAGTTCACTTGCTAGTCACCTGGACCACTGGCTGTTTAACCTTG30.24549918166939444No Hit
CTCACAGGTATCCTGACCAAACCAGATCTAATGGACAGGGGCACTGAGAA30.24549918166939444No Hit
CTTTGTCTGCCTGACTCGATATGTATCTCAAGGACTTAGTGCTCAATATA30.24549918166939444No Hit
TGGGAGGGGAGGTGGGGCCCGAGGAAACTTGCCTTCTGAGAGTCTGTCCT30.24549918166939444No Hit
GTGTGCTCTTTCTTTGTGCGATTCTTTGGCATCAGATCAAGGCTCTCATC30.24549918166939444No Hit
TTTGGTAACTCCATTCCAATCTCTCCCTCCAAGGCACTGGGGTCTATGGA30.24549918166939444No Hit
GCCACGGGCAGGGAGAGTGACCTTGATCACTAGGGATGGGATGAGGATGG30.24549918166939444No Hit
ACAGTTGCCTGGGTGCAGGCTGGTGGCAAGTGTCTTTCTTATGCACCACT30.24549918166939444No Hit
TGGGAAAGACAGGACGCTGGGAGAGAGGCCGCTGAGAGAGACAGGCCACT30.24549918166939444No Hit
CTGTTTGAGGGGATCACTGACCTTTCCATTTCCCTTCTTTAACCATCTCA20.16366612111292964No Hit
GAGGGTACTTGTTTGCTTGTTTGGACAGATCAGTGGGGCATCTTAGCCAA20.16366612111292964No Hit
CTCCCTCTTGTGTCTTTGCAGAGCTTGTCAGGAAGATCGGAGGTGCCAAG20.16366612111292964No Hit
CAGCAGGATTAGGGGCATCTCCCAGAGCCCCAGATGGGTTCAGAAAATGA20.16366612111292964No Hit
GACTTGTCAAGCCCAAGTCAGAACCTGGGCATGAGGCCCCCACCTGGGCA20.16366612111292964No Hit
ATCTCTTCTCGGACTTTCTTCAGAACAACACTGTAAATCTGATCTTGACA20.16366612111292964No Hit
GAATGTAGGTTTCGGGTTGTCTGGTGTGTGCCTGGTGAACCATCTGTCTC20.16366612111292964No Hit
GGGGGCCGGGCCATCATCACCAAGAGCTTTGCCAGGATCCACGGTGAGCT20.16366612111292964No Hit
CTGGGTTTGTTTTCCTGTAGCTAAGATGACCTACCTCATGAGTTTGTGGG20.16366612111292964No Hit
AGCCTCGCCAGCCTGCCATTACATCCCTGGCCTCATGGTTCCAAATGACA20.16366612111292964No Hit
CCTGACCAAACCAGATCTAATGGACAGGGGCACTGAGAAAAGCGTCATGA20.16366612111292964No Hit
AGCAGCGTCCTTCTCTGCCCCCTGCCAGTTTGGAGGAAACATCATTTGTG20.16366612111292964No Hit
CATAAAATACTGAATTATAAATGGGATCTGGTTGGCGAGACGTTTGCTGG20.16366612111292964No Hit
TTCCCAAGGATAGCAGCACCTCCCAGGGCCCTGTGCCCCTTTGCATCTGC20.16366612111292964No Hit
AAGCGGCATCCTGCACCGACTCCCCTTAGAATGAATGAGTACGCACAAGA20.16366612111292964No Hit
AATGAGGATGGAATGAGGCACTGGAGGATCAAGACTGCAGAGGACCTTGT20.16366612111292964No Hit
AGCAGGACCTGGCCCTGCCAGCCATCGCCGTCATCGGGGACCAGAGCTCG20.16366612111292964No Hit
AGCAGAAGGTGCGCCCCTGCATTGACCTCATCGACTCCCTGCGGGCTCTG20.16366612111292964No Hit
ACCCTGCACACCTGCAGCCAAATCCTCCCAGCATCTGCCCCTGTGAGGCC20.16366612111292964No Hit
GAGTGACTTGGGCATGCTGTATTGATGACTTGTCACCCAACCCACGTGGC20.16366612111292964No Hit
CTCTGCTCTGCAGCCAAACCTCCCTTCCATCTCCCACCTGCGTCTTGACT20.16366612111292964No Hit
GTCAAGGTGGCCTACACATGTAATCCCAGCACTTTGGGAGGCTGGGGCAG20.16366612111292964No Hit
CCCATGCCTCACAGGGCTGCTTTTTCAGTTTCAGCACCAGCGGACACCTG20.16366612111292964No Hit
CACTTGCCCTTAGGCAGCAGGCGAGGAAGGGCCCCTCCAGCCCCTTTACC20.16366612111292964No Hit
CCTCCTGAGCAGAAGCCAGGCAGGCAGGTGCTCCTGGAGTCACCAGCTCC20.16366612111292964No Hit
TCTCTCCCAGCAGCCTGTCTCCCAGAGGCCTGTCTCCCAGCGGCCTGTCT20.16366612111292964No Hit
TTATTTCTGCTTGCATTTTACTGATGTTTTCTTCTTCTTCTCCTTTTTGT20.16366612111292964No Hit
TGTGAACAAAACTCCACTTTGCAACATTGCCTCTGCGTACAGTGGGGAGC20.16366612111292964No Hit
CCTGCATTGACCTCATCGACTCCCTGCGGGCTCTGGGTGTGGAGCAGGAC20.16366612111292964No Hit
CAGGTAGGGCCAGACAGGTGAGGACGGTGCCCTCCTCTGCCTTATAACCT20.16366612111292964No Hit
TCACTTCCTTCTCAACCTCACAGCACCTCCTGTGCAGGCAGGGAGGGCGC20.16366612111292964No Hit
TCGCTCAGGAATCGTAACCAGGTGTCCGCTGGTGCTGAAACTGAAAAAGC20.16366612111292964No Hit
GATCTGGTTGGCGAGACGTTTGCTGGTTTCCTGGAAGAGGGAGAAAGAAG20.16366612111292964No Hit
AAGGACTTCAACTTTCTCACTTTGAACAATCAGCCACCACCAGGAAACAG20.16366612111292964No Hit
AATACTGAATTATAAATGGGATCTGGTTGGCGAGACGTTTGCTGGTTTCC20.16366612111292964No Hit
CGTGGGGTGCTGAGTCCTCAGTTCCCACAAGGACAGACTCTCAGAAGGCA20.16366612111292964No Hit
CCATGAGATGAGGTGGGCGGGTGGACATCTCCTTGCAACGCCGGTCCCAG20.16366612111292964No Hit
AAGGGCAGCTGCAGGGCCACCAGGGAAGGATGCAGTGTCACGTGGAGTCC20.16366612111292964No Hit
AAGGTCGCATTCAGTGCCAGTGCTTGGTCAGCCATGACCCTGCACCATGC20.16366612111292964No Hit
AGCCTGGAGATCACCTCCCCTGAGGTTCCAGACCTGACCATCATTGACCT20.16366612111292964No Hit
AACCTGTTTGAGGGGATCACTGACCTTTCCATTTCCCTTCTTTAACCATC20.16366612111292964No Hit
GTATTAGTTGCAAGTATGCCTACCCAGTTTTTAAAATCCTCTCTGATTTT20.16366612111292964No Hit
CCCTCGGGGCCTCGTTTGGGTCTCATTCACGCAGGCTTCACTTGCCCTTA20.16366612111292964No Hit
TCCCCAGAGGGTTAAAAATCTCTTCTCGGACTTTCTTCAGAACAACACTG20.16366612111292964No Hit
TGGGGCAGGTGGGTCAAAAATTCCAGATCTTCCTGGATGCTTTAAAGGGC20.16366612111292964No Hit
CGTCCACATGCTGCCCGCTGCTGTCCTTGGGTGGGTGCTGGTAGGTGTCC20.16366612111292964No Hit
GAGCTCTGGTCCCCGATGACGGCGATGGCTGGCAGGGCCAGGTCCTGCTC20.16366612111292964No Hit
CATAATACAGAAGGGCTTAATACATTGTAGTGGTCCCTCCCTCCTTCCCT20.16366612111292964No Hit
GGTACAGACTCCAGCTCACCGTGGATCCTGGCAAAGCTCTTGGTGATGAT20.16366612111292964No Hit
CATTTCTTTTTTCAGGTATTTTCGAGAAGAAAATTGACTTCTCCTCCGGT20.16366612111292964No Hit
AGCTACCGGAACACCGAGCTAGAGCTTCAGGACCCTGGCCAGGTGGAGAA20.16366612111292964No Hit
TTAACCTTGAGAGAAGTTGGATATTCACTGTCATTTGGAACCATGAGGCC20.16366612111292964No Hit
CTGGTCTGGGTAAATACCACCCTGTTTTGCAGGGAGCCCTGCCCAGAACT20.16366612111292964No Hit
TTCTAAACAAAACAATTGCAAACAATCAAACTGCGGCTTAAGAGATTGGC20.16366612111292964No Hit
GCACCACTTGGCTTTTCTGATGGCACGTGTTGCCCCGGGGAGCTGGGCTC20.16366612111292964No Hit
TGTGATCTCCTGCTGGCCCCGGCACTTCACAATCATGTAGCCCTTCTTGA20.16366612111292964No Hit
TCTGGTTTGGTCAGGATACCTGTGAGATGGTTAAAGAAGGGAAATGGAAA20.16366612111292964No Hit
TTCAGTATTTTATGCTCCGAGAGAATGGTGACTCCTTGCAGAAAGCCATG20.16366612111292964No Hit
CTTCTGAGAGTCTGTCCTTGTGGGAACTGAGGACTCAGCACCCCACGCAT20.16366612111292964No Hit
TTCAGCACCAGCGGACACCTGGTTACGATTCCTGAGCGAGAGGTTCCCCA20.16366612111292964No Hit
GTAATCCCAGCACTTTGGGAGGCTGGGGCAGGTGGGTCAAAAATTCCAGA20.16366612111292964No Hit
CAGAGTGAGACCGCTACCAAGAGAAGAATCCTTAAGGAGAGAATTTACCG20.16366612111292964No Hit
CCCACCCTCTCCTATCGCGGTTTGCAGGTCTAGGGAACTCAGTCTCCTGG20.16366612111292964No Hit
AATATCCAACTTCTCTCAAGGTTAAACAGCCAGTGGTCCAGGTGACTAGC20.16366612111292964No Hit
CTGCTCAGTCCAGACCCCCTCACCTACTACCAGGCCCCAGGGAGAGCCAG20.16366612111292964No Hit
TCCTGCAGCAGGGAATGGGGATGCGTGGGGTGCTGAGTCCTCAGTTCCCA20.16366612111292964No Hit
ATATTTCTGGGTTTTGTTCGTTGAGAGACAGTTGCTGATTACCAAGGGTT20.16366612111292964No Hit
AGGCGCTGGCTGGTGGGGCTCACGTCCACATGCTGCCCGCTGCTGTCCTT20.16366612111292964No Hit
TTCCAAATGACAGTGAATATCCAACTTCTCTCAAGGTTAAACAGCCAGTG20.16366612111292964No Hit
CGGGCAAGAGCTCTGTGCTGGAGGCACTGTCAGGAGTCGCGCTTCCCAGA20.16366612111292964No Hit
CAACTTCTTCGTGGATAATATTTTTAACTGCAACATCAAACAGACCTCCA20.16366612111292964No Hit
CCCAGAGGGTTAAAAATCTCTTCTCGGACTTTCTTCAGAACAACACTGTA20.16366612111292964No Hit
GTGACTTGAGGAAGAGGAGAAGGAACCGAGGAAGTGAGAGGAGCGGCTGC20.16366612111292964No Hit
AGAATCTAAGAAACAATAATTTGTCTAAATAAGCCAAGAAATCTAGCACA20.16366612111292964No Hit
CTACTAACTTTTCGATGTCCTGATTAAACATCTTGATTTTCTGAAAATGA20.16366612111292964No Hit
TGCTGGTTTCCTGGAAGAGGGAGAAAGAAGGGTTTGCTGGAGTGGTCTCA20.16366612111292964No Hit
CGCTGCCTCTGGGAAGCGCGACTCCTGACAGTGCCTCCAGCACAGAGCTC20.16366612111292964No Hit
CACCTGCCTGCCTGGCTTCTGCTCAGGAGGCGGCTTCACTCCCCAGGAGA20.16366612111292964No Hit
GGCTGACATCCCCAGCCAGGAGGCCGACAAGATGTTCTTTCTAATTGAGG20.16366612111292964No Hit
AGCTGCCCTTCCCCTTCTTCACCCATGAGATGAGGTGGGCGGGTGGACAT20.16366612111292964No Hit
CTTTCCTCGCCAAGGACTTCAACTTTCTCACTTTGAACAATCAGCCACCA20.16366612111292964No Hit
CACGGGCAGGGAGAGTGACCTTGATCACTAGGGATGGGATGAGGATGGCC20.16366612111292964No Hit
CATTCTCCCTTACAACTTCTTCTCCTTCTACTAACTTTTCGATGTCCTGA20.16366612111292964No Hit
TCCCCATGCTGCTGACCTTGATGAGGATCTGCAGGTCCTCCAGGTCCTTG20.16366612111292964No Hit
CCTTGTAGTAGCGGGCAGTGTCAGGGACGGGGCCAAACTCCTGAGTGACG20.16366612111292964No Hit
GGGATCACTGACCTTTCCATTTCCCTTCTTTAACCATCTCACAGGTATCC20.16366612111292964No Hit
CCTCATCTCATGGGTGAAGAAGGGGAAGGGCAGCTGCAGGGCCACCAGGG20.16366612111292964No Hit
CCGTTGAACTTACCGCTGCCTCTGGGAAGCGCGACTCCTGACAGTGCCTC20.16366612111292964No Hit
CCCCATGTGGGAGCACATGGGGCTAGGAGCTGAGTGGTCACTGTGGGGGT20.16366612111292964No Hit
AGGCTAGGTTATACTACCTTGTGTAATTTGTGCATACACTTTGGTCATGA20.16366612111292964No Hit
AGTGAATATCCAACTTCTCTCAAGGTTAAACAGCCAGTGGTCCAGGTGAC20.16366612111292964No Hit
GGGCTACATGATTGTGAAGTGCCGGGGCCAGCAGGAGATCACAAACAGGC20.16366612111292964No Hit
CAGAAGAGGAATTTTATCTACAGCCCAAGTGCCACATGCCCTCTCTTGCC20.16366612111292964No Hit
CTCTGAAATGAGACAGACATTCATGCATTCAGGAAGGACTTGTGTACCAT20.16366612111292964No Hit
GCTTACTCCGGCAGCGAACACTTCCCAAGGATAGCAGCACCTCCCAGGGC20.16366612111292964No Hit
AACCACAGGCCTTGGGCTGAGACCACTCCAGCAAACCCTTCTTTCTCCCT20.16366612111292964No Hit
TGATCTCCTGCTGGCCCCGGCACTTCACAATCATGTAGCCCTTCTTGAGG20.16366612111292964No Hit
TACTGAAGCTCTCATACCCTGGAAAGGAGCAGTCATTACCTTCAGGAACT20.16366612111292964No Hit
CTTCCAAATTTGTTTAAGCCAACAGGAAAGAAGAAAAAGAAGTAATGTGT20.16366612111292964No Hit
CGAGGCAAGGAGCTTCTGGGATTTGTCAACTACAAGACATTTGAGATCAT20.16366612111292964No Hit
CTCCAGGAGCTGCAGGCGCTGGCTGGTGGGGCTCACGTCCACATGCTGCC20.16366612111292964No Hit
CTACATGATTGTGAAGTGCCGGGGCCAGCAGGAGATCACAAACAGGCTGA20.16366612111292964No Hit
CCAAAGCAGAAGCGGCATCCTGCACCGACTCCCCTTAGAATGAATGAGTA20.16366612111292964No Hit
CCACGAAGAAGTTGAAAAATATGAAAAGCAGTATCGAGGCAAGGAGCTTC20.16366612111292964No Hit
CCTGGAATGATGTCCCACCCTCTCCTATCGCGGTTTGCAGGTCTAGGGAA20.16366612111292964No Hit
TACGGCGAGGGCTCGAGCCGGGAGCATGCAGCTCTGGAGCCTCGCCACCT20.16366612111292964No Hit
TTCTTCACCCATGAGATGAGGTGGGCGGGTGGACATCTCCTTGCAACGCC20.16366612111292964No Hit
CACTGTGGGGGTGACTTGAGGAAGAGGAGAAGGAACCGAGGAAGTGAGAG20.16366612111292964No Hit
CAGATACTACAGGAAAAAAATCGCTATTCCTGGCTGCTTCAAGAGCAGAG20.16366612111292964No Hit
CCTCGTTTGGGTCTCATTCACGCAGGCTTCACTTGCCCTTAGGCAGCAGG20.16366612111292964No Hit
GAGGAAGTGAGAGGAGCGGCTGCCAGATCCGAACCTCAGAATGACGTGGG20.16366612111292964No Hit
CGGGGCCTCGTTTGGGTCTCATTCACGCAGGCTTCACTTGCCCTTAGGCA20.16366612111292964No Hit
AGCCGGGAAGCTGAGCGTCGGATGTGCACTGTGTGAGCCTAAGAAGGGGC20.16366612111292964No Hit
TTATCTAACCAGAGCACGATTGAAGACATAAAAGTGAAACACACAGCAAA20.16366612111292964No Hit
TACATCCCTGGCCTCATGGTTCCAAATGACAGTGAATATCCAACTTCTCT20.16366612111292964No Hit
GGGGGACCCGGGCCCCTAACCTTGCCAGGGGTGAAGTCCTTCAGGCCCTG20.16366612111292964No Hit
CAGGTGGGTGAGGCCAGGCAGGTAGGGCCAGACAGGTGAGGACGGTGCCC20.16366612111292964No Hit
GAGGAGCTGCGGCGTTGCGGGGCTGACATCCCCAGCCAGGAGGCCGACAA20.16366612111292964No Hit
CGTGCTGCTGAGTGACCAGAAGTGAGACGTGTGCTCTTTCTTTGTGCGAT20.16366612111292964No Hit
GGGGCCTGACTAGCCTGGAGAGCTTCATTTTCTGAACCCATCTGGGGCTC20.16366612111292964No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers